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PPS | Web server for taxonomic assignment of metagenome sequences

A web server for the taxonomic assignment of metagenome sequences. PhyloPythiaS is a fast and accurate sequence composition-based classifier that utilizes the hierarchical relationships between clades. Taxonomic assignments with the web server can be made with a generic model, or with sample-specific models that users can specify and create. Several interactive visualization modes and multiple download formats allow quick and convenient analysis and downstream processing of taxonomic assignments.

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PPS forum

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PPS classification

PPS specifications

Unique identifier:
OMICS_01460
Interface:
Web user interface
Programming languages:
Javascript, PHP
Stability:
Stable
Name:
PhyloPythiaS
Restrictions to use:
Academic or non-commercial use
Computer skills:
Basic
Maintained:
No

PPS support

Maintainer

This tool is not maintained anymore.

Credits

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Publications

Institution(s)

Max-Planck Research Group for Computational Genomics and Epidemiology, Max-Planck Institute for Informatics, Saarbrücken, Germany; Department of Algorithmic Bioinformatics, Heinrich-Heine University, Düsseldorf, Germany

Funding source(s)

Max-Planck society; the Heinrich-Heine University

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