phyloSkeleton statistics

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phyloSkeleton specifications

Information


Unique identifier OMICS_14707
Name phyloSkeleton
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.0.1
Stability Beta
Requirements
prodigal, prokka, HMMer, barrnap, Perl::Test::Simple, File::Share, Archive::Extract, Text::CSV, Parallel::Forkmanager, BioPerl
Maintained Yes

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Documentation


Maintainer


  • person_outline Lionel Guy <>

Publication for phyloSkeleton

phyloSkeleton in publication

PMCID: 5686408
PMID: 29133450
DOI: 10.1098/rsta.2016.0352

[…] to ultimately infer conditions that approach the last universal common ancestor and possibly life's origins., representative genomes for different taxonomic groups were selected using the software phyloskeleton [] (available at https://bitbucket.org/lionelguy/phyloskeleton) as follows: one for each species of streptococcus, one for each family in proteobacteria and cyanobacteria, and one […]


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phyloSkeleton institution(s)
Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden

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