Phylotyper specifications


Unique identifier OMICS_20065
Name Phylotyper
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
License Apache License version 2.0
Computer skills Advanced
Stability Stable
Requirements FastTree, MAFFT, trimAI, BLAST+,R
Maintained Yes



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  • person_outline Matthew Whiteside <>

Publication for Phylotyper

Phylotyper institution(s)
National Microbiology Laboratory, Public Health Agency of Canada, Lethbridge, AB, Canada
Phylotyper funding source(s)
Supported in part by the Public Health Agency of Canada and a grant from the Genomics Research and Development Initiative.

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