PhyloWS statistics

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Citations per year

Number of citations per year for the bioinformatics software tool PhyloWS

Tool usage distribution map

This map represents all the scientific publications referring to PhyloWS per scientific context
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Associated diseases

This word cloud represents PhyloWS usage per disease context

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PhyloWS specifications


Unique identifier OMICS_23512
Name PhyloWS
Alternative name Phyloinformatics Web Services
Software type Application/Script
Interface Application programming interface
Restrictions to use None
Computer skills Advanced
Stability Alpha
Maintained Yes



  • person_outline Hilmar Lapp
  • person_outline Hilmar Lapp

Additional information

PhyloWS citations


Papain like and legumain like proteases in rice: genome wide identification, comprehensive gene feature characterization and expression analysis

BMC Plant Biol
PMCID: 5952849
PMID: 29764367
DOI: 10.1186/s12870-018-1298-1

[…] mic Express Database ( Protein sequence and phylogeny data, including alignments, have been deposited in the TreeBASE repository ( […]


First molecular detection and characterization of Marek’s disease virus in red crowned cranes (Grus japonensis): a case report

PMCID: 5883596
PMID: 29615025
DOI: 10.1186/s12917-018-1437-9

[…] The datasets analysed during the current study are available in the TreeBASE repository. Our data are posted as NEXUS files in the following public domain resources: The viral protein sequences of different MDV strains were deposited in GenBank under the accession number in Tables , and . […]


Comparison of taxon‐specific versus general locus sets for targeted sequence capture in plant phylogenomics

Appl Plant Sci
PMCID: 5895190
PMID: 29732262
DOI: 10.1002/aps3.1032

[…] locus sets. Concatenated alignments for each locus set are available in the Dryad Digital Repository (; Chau et al., ) and TreeBASE ( […]


Alternative splicing after gene duplication drives CEACAM1 paralog diversification in the horse

BMC Evol Biol
PMCID: 5856374
PMID: 29544443
DOI: 10.1186/s12862-018-1145-x

[…] available at NCBI GenBank accession numbers MF564057- MF564071. Phylogenetic trees, sequence data and alignments used to produce the results are available at TreeBASE ( […]


MADS box family genes in sheepgrass and their involvement in abiotic stress responses

BMC Plant Biol
PMCID: 5853078
PMID: 29540194
DOI: 10.1186/s12870-018-1259-8

[…] this manuscript as Additional files , , and . We have uploaded the sequence data and phylogeny data to the Treebase repository with the following Study Accession URL: […]


Preliminary studies on isolates of Clostridium difficile from dogs and exotic pets

PMCID: 5845233
PMID: 29523201
DOI: 10.1186/s12917-018-1402-7

[…] The datasets generated and/or analysed during the current study are available in the TreeBASE repository, datasets generated and/or analysed during the current study are not publicly available due to the full clinical files from the animals whose samples were included in this […]

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