PhymmBL pipeline

PhymmBL specifications

Information


Unique identifier OMICS_01461
Name PhymmBL
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C++, Perl
Computer skills Advanced
Version 4.0
Stability Stable
Maintained Yes

Versioning


Add your version

Publications for PhymmBL

PhymmBL citation

2015
PMCID: 4620155

[…] genomes by binning scaffolds clustered together in well-supported clades represented in the resulting tree. to reduce heterogeneity in our genome bins we also used coverage, gc-content and taxonomy (phymmbl, brady and salzberg, 2009 with an e-value cut-off of 10−5) to define our contig clusters. for better taxonomic classification, we increased the resolution of phymmbl by adding the genomes […]

PhymmBL institution(s)
Center for Bioinformatics and Computational Biology, University of Maryland, College Park, MD, USA
PhymmBL funding source(s)
NIH grant R01-LM006845

PhymmBL reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review PhymmBL