Physher specifications

Unique identifier:
OMICS_12356
Interface:
Command line interface
Input data:
Physher requires a single configuration file. For inferring rates and times, the configuration file requires an alignment (FASTA or NEXUS format) and a rooted tree (Newick or NEXUS format).
Operating system:
Unix/Linux, Mac OS
Stability:
Stable
Software type:
Package/Module
Restrictions to use:
None
Output data:
Output trees are in nexus format as they contain information such as rates and confidence intervals.
Computer skills:
Advanced
Maintained:
Yes

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Physher support

Documentation

Maintainer

  • Mathieu Fourment <>

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Publications

Institution(s)

Marie Bashir Institute for Infectious Diseases and Biosecurity, Charles Perkins Centre, School of Biological Sciences and Sydney Medical School, The University of Sydney, Sydney, Australia

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