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PIANA specifications


Unique identifier OMICS_08984
Alternative name Protein Interactions And Network Analysis
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Database management system MySQL
License GNU General Public License version 2.0
Computer skills Medium
Version 1.4
Stability Stable
Maintained Yes


No version available

Publications for Protein Interactions And Network Analysis

PIANA citation


Characterization of Protein Hubs by Inferring Interacting Motifs from Protein Interactions

PLoS Comput Biol
PMCID: 1976338
PMID: 17941705
DOI: 10.1371/journal.pcbi.0030178

[…] ositions (gaps) and a maximum of one flexible (of variable length) gap region. The number of nonredundant patterns for all iMotifs was 80,654. Next, all patterns were searched against all proteins in PIANA with at least one interaction (a dataset of 42,040 sequences) using the ps_scan program [].The significance (i.e., p-value) of the association between a sequence pattern and an iMotif was assess […]

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PIANA institution(s)
Structural Bioinformatics Group (GRIB–IMIM) Departament de Ciències Experimentals i de la Salut Universitat Pompeu FabraC, Barcelona, Catalonia, Spain

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