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Pig Genomic Informatics System PigGIS

Online

Furnishes pig gene annotations in all sequenced genomic regions. PigGIS gathers 3.84 million whole genome shotgun (WGS) records generated by the Sino–Danish Pig Genome Project, 870 084 expressed sequence tags (ESTs) from 100 differentiated pig tissues/developmental stages, and 589 996 genomic reads together with 570 773 mRNA sequences extracted from GenBank.

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PigGIS forum

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PigGIS classification

PigGIS specifications

Restrictions to use:
None
Community driven:
No
User data submission:
Not allowed
Database management system:
MySQL
Data access:
File download, Browse
Maintained:
Yes

PigGIS support

Maintainers

  • Jun Wang <>
  • Lars Bolund <>

Credits

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Publications

Institution(s)

Beijing Institute of Genomics of the Chinese Academy of Sciences, Beijing Genomics Institute, Beijing China; Graduate University of the Chinese Academy of Sciences, Beijing, China; Department of Biochemistry and Molecular Biology, University of Southern Denmark, Denmark; Institute of Human Genetics, University of Aarhus, Denmark

Funding source(s)

Supported by Chinese Academy of Sciences (GJHZ0518), Ministry of Science and Technology under program CNGI-04-15-7A; Ministry of Education (XXBKYHT2006001); National Natural Science Foundation of China (90608010; 90208019; 90403130; 30221004; 90612019); China National Grid; the Danish Platform for Integrative Biology, the Ole Rømer grant from the Danish Natural Science Research Council; and the Danish Medical Research Council.

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