PileLine specifications

Unique identifier:
OMICS_14954
Interface:
Command line interface
Input data:
Genomic position files containing the chromosome name and the coordinate position as the two first columns.
Output format:
BED, GFF, VCF
Programming languages:
Java
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes
Software type:
Toolkit/Suite
Restrictions to use:
None
Input format:
BED, GFF, VCF
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU Lesser General Public License version 3.0
Version:
1.2
Requirements:
JRE, Apache Ant

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PileLine distribution

download

PileLine support

Documentation

Maintainer

  • Daniel Glez-Pena <>

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Publications

Institution(s)

Higher Technical School of Computer Engineering, University of Vigo, Ourense, Spain; Bioinformatics Unit (UBio), Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid, Spain

Funding source(s)

This work has been partially funded by the Spanish Ministry of Science and Innovation, the Plan E from the Spanish Government and the European Union from the ERDF (TIN2009-14057-C03-02).

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