PileLine specifications


Unique identifier OMICS_14954
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Input data Genomic position files containing the chromosome name and the coordinate position as the two first columns.
Input format BED, GFF, VCF
Output format BED, GFF, VCF
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
License GNU Lesser General Public License version 3.0
Computer skills Advanced
Version 1.2
Stability Stable
Requirements JRE, Apache Ant
Maintained Yes



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  • person_outline Daniel Glez-Pena <>

PileLine article

PileLine institution(s)
Higher Technical School of Computer Engineering, University of Vigo, Ourense, Spain; Bioinformatics Unit (UBio), Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid, Spain
PileLine funding source(s)
Supported by the Spanish Ministry of Science and Innovation, the Plan E from the Spanish Government and the European Union from the ERDF (TIN2009-14057-C03-02).

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