PIVOT specifications

Information


Unique identifier OMICS_23593
Name PIVOT
Alternative name Platform for Interactive analysis and Visualization Of Transcriptomics data
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Input data An expression matrix, counts files, 10x data
Input format TXT,CSV,XLS
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Medium
Version 1.0.0
Stability Stable
Requirements
RStudio
Maintained Yes

Download


download.png

Versioning


No version available

Maintainer


  • person_outline Qin Zhu

Additional information


https://rawgit.com/qinzhu/PIVOT/master/inst/app/www/manual_file.html http://qinsr.com/wp-content/uploads/2017/11/manual_file.html http://kim.bio.upenn.edu/software/pivot.shtml

Publication for Platform for Interactive analysis and Visualization Of Transcriptomics data

PIVOT citation

library_books

PIVOT: platform for interactive analysis and visualization of transcriptomics data

2018
BMC Bioinformatics
PMCID: 5756333
PMID: 29304726
DOI: 10.1186/s12859-017-1994-0

[…] nsistent across statistical packages. The Shiny framework translates user-driven events (e.g. pressing buttons) into R interpretable reactive data objects, and present results as dynamic web content. PIVOT incorporates four key features that assists user interactions, integrative analysis and provenance management:PIVOT directly integrates existing open source packages by wrapping the packages wit […]

PIVOT institution(s)
Department of Biology, University of Pennsylvania, Philadelphia, PA, USA
PIVOT funding source(s)
Supported by NIMH grant U01MH098953.

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