PIVOT statistics

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Citations per year

Number of citations per year for the bioinformatics software tool PIVOT

Tool usage distribution map

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Associated diseases


Popular tool citations

chevron_left Clustering Cell lineage and pseudotime inference scRNA-seq data visualization Normalization Dimensionality reduction Quality control Differential expression detection Gene filtering Gene network prediction Gene set prediction chevron_right
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PIVOT specifications


Unique identifier OMICS_23593
Alternative name Platform for Interactive analysis and Visualization Of Transcriptomics data
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Input data An expression matrix, counts files, 10x data
Input format TXT,CSV,XLS
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Medium
Version 1.0.0
Stability Stable
Maintained Yes




No version available


  • person_outline Qin Zhu

Additional information

https://rawgit.com/qinzhu/PIVOT/master/inst/app/www/manual_file.html http://qinsr.com/wp-content/uploads/2017/11/manual_file.html http://kim.bio.upenn.edu/software/pivot.shtml

Publication for Platform for Interactive analysis and Visualization Of Transcriptomics data

PIVOT citation


PIVOT: platform for interactive analysis and visualization of transcriptomics data

BMC Bioinformatics
PMCID: 5756333
PMID: 29304726
DOI: 10.1186/s12859-017-1994-0

[…] PIVOT is designed to aid exploratory analysis for both single cell and bulk RNA-Seq data, thus we have incorporated a large set of commonly used tools (see Table , also Additional file : Table S1 for […]

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PIVOT institution(s)
Department of Biology, University of Pennsylvania, Philadelphia, PA, USA
PIVOT funding source(s)
Supported by NIMH grant U01MH098953.

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