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Planarian formalization Planform

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A manually curated database and software tool for planarian regenerative experiments, based on a mathematical graph formalism. Planform contains more than a thousand experiments from the main publications in the planarian literature. The software tool provides the user with a graphical interface to easily interact with and mine the database. The presented system is a valuable resource for the regeneration community and, more importantly, will pave the way for the application of novel artificial intelligence tools to extract knowledge from this dataset.

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Planform forum

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Planform classification

  • Animals

Planform specifications

Software type:
Application/Script
Restrictions to use:
None
Programming languages:
C++
Stability:
Stable
Interface:
Graphical user interface
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Medium
Maintained:
Yes

Planform distribution

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No versioning.

Planform support

Maintainer

  • Daniel Lobo <>

Credits

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Publications

Institution(s)

Department of Biology, Center for Regenerative and Developmental Biology, Tufts University, Medford, MA, USA

Funding source(s)

National Science Foundation (EF-1124651), National Institutes of Health (GM078484), US Army Medical Research and Materiel Command (#W81XWH-10-2-0058) and G. Harold and Leila Y. Mathers Charitable Foundation

Link to literature

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