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PGP | A plant phenomics and genomics data publication infrastructure

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An infrastructure to comprehensively publish plant research data. PGP covers in particular cross-domain datasets that are not being published in central repositories because of its volume or unsupported data scope, like image collections from plant phenotyping and microscopy, unfinished genomes, genotyping data, visualizations of morphological plant models, data from mass spectrometry as well as software and documents. After an internal review process, data are published as citable digital object identifiers and a core set of technical metadata is registered at DataCite. The repository uses e!DAL as software infrastructure and a Hierarchical Storage Management System as data archival backend.

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PGP classification

  • Plants

PGP specifications

Unique identifier:
OMICS_13414
Restrictions to use:
None
Community driven:
No
User data submission:
Allowed
Name:
Plant Genomics and Phenomics Research Data Repository
Database management system:
Oracle
Data access:
File download, Browse
Maintained:
Yes

PGP support

Maintainer

  • Daniel Arend <>

Credits

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Publications

Institution(s)

Leibniz Institute for Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany

Funding source(s)

Part of this work was performed within the German-Plant-Phenotyping Network, which is funded by the German Federal Ministry of Education and Research (project identification number: FKZ031A053).

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