×
Create your own tool library
Bookmark tools and put favorites into folders to find them easily.

Plant Transcription Factor Database PlantTFDB

Troubles

A database of functional and evolutionary study of plant transcription factors. With the version 4.0, PlantTFDB offers 320 370 TFs from 165 species. Three types of annotation provide more directly clues to investigate functional mechanisms underlying: (i) a set of high-quality, non-redundant TF binding motifs derived from experiments, (ii) multiple types of regulatory elements identified from highthroughput sequencing data and (iii) regulatory interactions curated from literature and inferred by combining TF binding motifs and regulatory elements.

User report

×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Sort by:

2 user reviews

2 user reviews

Z's avatar image

Z

very useful resource, not only for plant transcription factors, but also for regulation data and analsyis

good's avatar image

good

very good

PlantTFDB forum

×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.

PlantTFDB classification

  • Plants

PlantTFDB specifications

Restrictions to use:
None
Community driven:
No
User data submission:
Not allowed
Maintained:
Yes
Database management system:
MySQL
Data access:
File download, Browse
Version:
4.0

PlantTFDB support

Documentation

Maintainer

  • PlantRegMap Team <>

Credits

×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.

Publications

Institution(s)

State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Center for Bioinformatics, Beijing, China; Peking-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, China

Funding source(s)

This work was supported by National Natural Science Foundation of China [1470330]; International Collaboration Program for Proteome Biological Big Data and Standard System [2014DFB30030]; State Key Laboratory of Protein and Plant Gene Research; China Postdoctoral Science Foundation Grant [2014M560017, 2015T80015]; Postdoctoral Fellowship at Peking Tsinghua Center for Life Sciences; National Program for Support of Top-notch Young Professionals.

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.