plantDARIO specifications

Unique identifier:
OMICS_17994
Restrictions to use:
None
Input format:
BAM, BED
Programming languages:
Python, R
Stability:
Stable
Interface:
Application programming interface
Input data:
A list of sequencing read positions.
Output format:
BED
Computer skills:
Advanced
Maintained:
Yes

plantDARIO support

Maintainer

  • Peter F. Stadler <>

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Publications

Institution(s)

Institut für Informatik, Martin-Luther-Universität Halle-Wittenberg, Halle (Saale), Germany; Bioinformatics Group, Department of Computer Science, Interdisciplinary Center for Bioinformatics, University Leipzig, Leipzig, Germany; ecSeq Bioinformatics, Leipzig, Germany; Institut für Pysikalische Biologie, Heinrich-Heine-Universität, Düsseldorf, Germany; German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany; Max Planck Institute for Mathematics in the Sciences, Leipzig, Germany; Fraunhofer Institute for Cell Therapy and Immunology, Leipzig, Germany; Department of Theoretical Chemistry of the University of Vienna, Vienna, Austria; Center for RNA in Technology and Health, University of Copenhagen, Frederiksberg, Denmark; Santa Fe Institute, Santa Fe, NM, USA

Funding source(s)

Supported by Deutsche Forschungsgemeinschaft (grant no. GR 3526/2 and JU 205/19).

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