plantDARIO specifications


Unique identifier OMICS_17994
Name plantDARIO
Interface Application programming interface
Restrictions to use None
Input data A list of sequencing read positions.
Input format BAM, BED
Output format BED
Programming languages Python, R
Computer skills Advanced
Stability Stable
Maintained Yes


  • person_outline Peter F. Stadler <>

Publication for plantDARIO

plantDARIO institution(s)
Institut für Informatik, Martin-Luther-Universität Halle-Wittenberg, Halle (Saale), Germany; Bioinformatics Group, Department of Computer Science, Interdisciplinary Center for Bioinformatics, University Leipzig, Leipzig, Germany; ecSeq Bioinformatics, Leipzig, Germany; Institut für Pysikalische Biologie, Heinrich-Heine-Universität, Düsseldorf, Germany; German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany; Max Planck Institute for Mathematics in the Sciences, Leipzig, Germany; Fraunhofer Institute for Cell Therapy and Immunology, Leipzig, Germany; Department of Theoretical Chemistry of the University of Vienna, Vienna, Austria; Center for RNA in Technology and Health, University of Copenhagen, Frederiksberg, Denmark; Santa Fe Institute, Santa Fe, NM, USA
plantDARIO funding source(s)
Supported by Deutsche Forschungsgemeinschaft (grant no. GR 3526/2 and JU 205/19).

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