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A toolkit for the study of transcriptional regulation in plants. PlantRegMap provides a comprehensive, high-quality resource of plant transcription factors, regulatory elements and interactions between them. It contains sets of high-quality transcription factor binding motifs for 157 plant species, multiple types of regulatory elements derived from experiments, and genome-wide transcriptional regulatory interactions. In addition, multiple online tools are set up for transcription factor prediction, transcription factor binding site prediction, regulation prediction and functional enrichment analyses.

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4 user reviews

4 user reviews

Divya Saxena's avatar image

Divya Saxena

please help me out.. I am not able to reach 'http://plantregmap.cbi.pku.edu.cn/'.
kindly tell me the reason of unavailability of the site.

PlantRegMap's avatar image

PlantRegMap

Hi PJ,
Didn't know how to contact you on the omictools website. I'm sorry about the unavailability of PlantRegMap a few days ago possibly due to the network connection of our university. If you still could not access our website, please feel free to connect us (planttfdb@mail.cbi.pku.edu.cn).
Best,

JinJP

PJ's avatar image

PJ

offline after a month? WTF!

Z's avatar image

Z

very useful resource for plant transcriptional regulatory data and analysis tools

PlantRegMap forum

No open topic.

PlantRegMap classification

  • Plants
    • Arabidopsis thaliana
    • Carica papaya
    • Cicer arietinum
    • Glycine max
    • Hordeum vulgare
    • Medicago truncatula
    • Oryza sativa
    • Populus trichocarpa
    • Triticum aestivum
    • Vitis vinifera
    • Zea mays

PlantRegMap specifications

Restrictions to use:
None
Database management system:
MySQL
Data access:
File download, Web user interface, Web service
Version:
1.0
Programming languages:
PHP
Community driven:
No
User data submission:
Not allowed

PlantRegMap support

Maintainer

  • PlantRegMap Team <>

Credits

Publications

Institution(s)

State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Center for Bioinformatics, Peking University, Beijing, China; Monsanto Biotechnology R&D Center, Beijing, China; State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing, China; Monsanto Company, North Chesterfield, MO, USA

Funding source(s)

This work was supported by funds from the National Natural Science Foundation of China (31470330), China 863 Programs (2006AA02Z334), and the State Key Laboratory of Protein and Plant Gene Research.

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