PlantsT specifications


Unique identifier OMICS_14719
Name PlantsT
Restrictions to use None
Community driven No
Data access Browse
User data submission Not allowed
Maintained Yes


  • person_outline Michael Gribskov

Publication for PlantsT

PlantsT citation


Phylogenetic and functional analysis of the Cation Diffusion Facilitator (CDF) family: improved signature and prediction of substrate specificity

BMC Genomics
PMCID: 1868760
PMID: 17448255
DOI: 10.1186/1471-2164-8-107

[…] g labelling, the cluster containing the Mn2+ transporter ShMTP1 was named MTP8 (AtMTP8 is the orthologue of ShMTP1 in Arabidopsis thaliana), following the nomenclature proposed for Arabidopsis at the PlantsT World Wide Web site []. Eleven of these 13 clusters clustered into three groups (Figure ), which are detailed below. We hypothesized that proteins belonging to the same group may share the sam […]

PlantsT institution(s)
San Diego Supercomputer Center and Department of Biology, University of California, San Diego, CA, USA; Department of Cell Biology, The Scripps Research Institute, La Jolla, CA, USA
PlantsT funding source(s)
This work is supported by the funding from National Science Foundation Plant Genome Program, DBI-9975808 (PlantsP) and DBI-0077378 (PlantsT). It was also assisted by the facilities of the National Biomedical Computation Resource at SDSC (NIH P41-RR08605).

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