Plasmid Profiler specifications


Unique identifier OMICS_17116
Name Plasmid Profiler
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data WGS short reads in FastQ format, the supplied 91 plasmid sequence database, and the supplied but user-modifiable replicon sequence and 92 gene of interest database.
Input format FastQ
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License Apache License version 2.0
Computer skills Advanced
Version 0.1.6
Stability Stable
Source code URL
Maintained Yes



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  • person_outline Adrian Zetner <>

Additional information

Publication for Plasmid Profiler

Plasmid Profiler institution(s)
National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada; Department of Medical Microbiology and Infectious Diseases, University of Manitoba, Winnipeg, MB, Canada

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