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Associated diseases

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PlasmoView specifications

Information


Unique identifier OMICS_09778
Name PlasmoView
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Taxon


  • Invertebrates
    • Plasmodium falciparum

Maintainer


Publication for PlasmoView

PlasmoView in publications

 (2)
PMCID: 5094156
PMID: 27821281
DOI: 10.1016/j.ijpddr.2016.08.004

[…] reports of the mutation are currently confined to nigeria and cameroon although one appears in a ghanaian isolate among publicly available whole genome sequences (, http://pathogenseq.lshtm.ac.uk/plasmoview). early sequencing surveillance studies of dhps in cameroon () did not detect the 431v among 355 samples collected in multiple sites (yaounde, djoum, manjo, bertoua and garoua) […]

PMCID: 4428623
PMID: 25817462
DOI: 10.1016/j.ijpara.2015.02.004

[…] of the gene. to understand how this compares to intra-species diversity, we examined publicly available whole genome data for over 600 p. falciparum isolates across this 200 aa segment, using the plasmoview freeware program (). we could identify only eight non-synonymous nucleotide substitutions across these 200 codons in p. falciparum and most were at low frequency, occurring […]


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PlasmoView institution(s)
Department of Pathogen Molecular Biology, London School of Hygiene and Tropical Medicine, Keppel Street, London, UK
PlasmoView funding source(s)
This work was supported by the Medical Research Council, UK (MDP and TGC MR/J005398/1) the Malaria Capacity Development Consortium (HO Wellcome Trust Grant WT084289MA) and the Intramural Research Program, National Institute of Allergy and Infectious Diseases, National Institutes of Health, USA (RMF).

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