PLEXY specifications


Unique identifier OMICS_16763
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data A snoRNA sequence with annotated box-motifs and a list of potential target RNAs.
Input format FASTA
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Stability Stable
Requirements RNAPLEX
Maintained Yes



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  • person_outline Stephanie Kehr <>

Publication for PLEXY

PLEXY institution(s)
Bioinformatics Group, Department of Computer Science, and Interdisciplinary Center for Bioinformatics, University of Leipzig, Leipzig, Germany; Institute for Theoretical Chemistry, University of Vienna, Vienna, Austria; Max Planck Institute for Mathematics in the Sciences, Leipzig, Germany; RNomics Group, Fraunhofer Institute Cell Therapy and Immunology, Leipzig, Germany; Center for non-coding RNAs in Technology and Health (RTH), University of Copenhagen, Copenhagen, Denmark; The Santa Fe Institute, Santa Fe, NM, USA
PLEXY funding source(s)
Supported by European Union under the auspices of the FP-7 QUANTOMICS project.

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