pMatch statistics

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Citations per year

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Popular tool citations

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Tool usage distribution map

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Associated diseases

Associated diseases

pMatch specifications


Unique identifier OMICS_22347
Name pMatch
Software type Application/Script
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Windows
Programming languages C++
Computer skills Advanced
Version 1.5
Stability Stable
Maintained Yes



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  • person_outline Yan Fu <>
  • person_outline Rui-Xiang Sun <>
  • person_outline Ding Ye <>

Publication for pMatch

pMatch in publications

PMCID: 5712829
PMID: 29135956
DOI: 10.3390/s17112619

[…] maximum values. it can also be found that, during the time period 100–300 s, φ>10∘, the horizontal distance estimation results are relatively stable. next, the p is scanned with the range of pmatch = 1–5000 m, and v^ is evaluated using the improved algorithm shown by (24). each of the estimated v^match expression corresponding to pmatch is: v^match= v^(100:300)¯. the pmatch corresponding […]

PMCID: 5450854
PMID: 28537227
DOI: 10.12659/MSM.902109

[…] using spss (version 16.0; spss inc., chicago, illinois, usa) and adjusted for age, sex, and bmi., p-match is a kind of functional prediction tool (, which is used to predict the effects of polymorphisms on the sequence structures of potential binding sites for transcription factors (tfs). this software is involved […]

PMCID: 5470612
PMID: 28680329
DOI: 10.5114/ceji.2017.67316

[…] at present, there have been few studies on the regulation of mir-20b expression. we used two bioinformatics software packages, p-match 1.0 ( and alibaba2 (, to predict the transcription factors that might be involved in the regulation of mir-20b […]

PMCID: 5522240
PMID: 28489573
DOI: 10.18632/oncotarget.17248

[…] transcription factor binding sites were predicted using the jaspar network tool software ( and p-match network platform ( to construct p27 promoter associated plasmids, the polymerase chain reaction (pcr) primers were designed (table ). genomic dna was extracted from lx-2 cells according to instructions […]

PMCID: 5100282
PMID: 27821049
DOI: 10.1186/s12859-016-1301-5

[…] with ptm based on the modification of the spectra from spectral libraries. notably, these methods are able to identify both specific and potential ptms (so-called blind ptm search). among these are pmatch [] and tier-wise scoring [] methods. these algorithms have not been tested on a large number of peptides with saps yet., in this paper we describe sap identification method based […]

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pMatch institution(s)
Institute of Computing Technology and Key Lab of Intelligent Information Processing, Chinese Academy of Sciences, Beijing, China; Graduate University of Chinese Academy of Sciences, Beijing, China
pMatch funding source(s)
Supported by the National Natural Science Foundation of China under grant no. 30900262; the CAS Knowledge Innovation Program under grant no. KGGX1-YW-13; the National Key Basic Research and Development Program (973) of China under grant no. 2010CB912701; and the National High Technology Research and Development Program (863) of China under grant nos.2007AA02Z315, 2008AA02Z309.

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