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PMcomp / PMmulti specifications


Unique identifier OMICS_15812
Name PMcomp / PMmulti
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Stability Stable
Maintained Yes


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  • person_outline Ivo Hofacker

Publication for PMcomp / PMmulti

PMcomp / PMmulti citation


Can Clustal style progressive pairwise alignment of multiple sequences be used in RNA secondary structure prediction?

BMC Bioinformatics
PMCID: 1904245
PMID: 17559658
DOI: 10.1186/1471-2105-8-190

[…] rofile implementation of Dynalign that we had created (described in the next section), but the results should be the same as for the original implementation with the same parameters.Experiments using PMcomp/PMmulti, RNAali-fold and Clustalw were run according to the author's recommended/default parameters. […]

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PMcomp / PMmulti institution(s)
Institut für Theoretische Chemie und Molekulare Strukturbiologie, Universität Wien, Vienna, Austria; Bioinformatik, Institut für Informatik, Universität Leipzig, Leipzig, Germany
PMcomp / PMmulti funding source(s)
This work was supported in part by the Austrian Fonds zur Förderung der Wissenschaftlichen Forschung, Project No. P15893, by the Austrian Gen-AU bioinformatics integration network sponsored by BM-BWK, and by the DFG Bioinformatics Initiative BIZ-6/1-2.

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