POLYBAYES protocols

POLYBAYES specifications

Information


Unique identifier OMICS_14876
Name POLYBAYES
Software type Package/Module
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Version 3.0
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Gabor Marth <>

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Publication for POLYBAYES

POLYBAYES IN pipelines

 (16)
2005
PMCID: 1239908
PMID: 16146575
DOI: 10.1186/1471-2105-6-220

[…] base quality score in the perfect block; 90%, minimum percent identity for query-anchor alignments; 97%, minimum percent identity for the highly similar regions of query-anchor alignments., although polybayes was not designed to deal with data sets of deep coverage, we tested polybayes on the eighteen data sets of deep coverage to see how polybayes would behave on the data sets. […]

2005
PMCID: 1239908
PMID: 16146575
DOI: 10.1186/1471-2105-6-220

[…] alignments; 97%, minimum percent identity for the highly similar regions of query-anchor alignments., although polybayes was not designed to deal with data sets of deep coverage, we tested polybayes on the eighteen data sets of deep coverage to see how polybayes would behave on the data sets. because polybayes takes only one anchor sequence, the corresponding anchor sequence […]

2005
PMCID: 1239908
PMID: 16146575
DOI: 10.1186/1471-2105-6-220

[…] similar regions of query-anchor alignments., although polybayes was not designed to deal with data sets of deep coverage, we tested polybayes on the eighteen data sets of deep coverage to see how polybayes would behave on the data sets. because polybayes takes only one anchor sequence, the corresponding anchor sequence was selected and given to polybayes for each data set. on eight […]

2005
PMCID: 1239908
PMID: 16146575
DOI: 10.1186/1471-2105-6-220

[…] polybayes was not designed to deal with data sets of deep coverage, we tested polybayes on the eighteen data sets of deep coverage to see how polybayes would behave on the data sets. because polybayes takes only one anchor sequence, the corresponding anchor sequence was selected and given to polybayes for each data set. on eight of the eighteen data sets, polybayes ran successfully […]

2005
PMCID: 1239908
PMID: 16146575
DOI: 10.1186/1471-2105-6-220

[…] eighteen data sets of deep coverage to see how polybayes would behave on the data sets. because polybayes takes only one anchor sequence, the corresponding anchor sequence was selected and given to polybayes for each data set. on eight of the eighteen data sets, polybayes ran successfully to completion. on the remaining data sets, polybayes terminated abnormally without producing any output […]

POLYBAYES institution(s)
Department of Genetics and Genome Sequencing Center, Washington University, St Louis, MO, USA; Division of Dermatology, St Louis, MO, USA
POLYBAYES funding source(s)
This work was supported by NIH grants P50HG01458, R01HG1720 and T32AR07284, and Compaq Computer Corporation.

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