polymapR statistics

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Citations per year

Number of citations per year for the bioinformatics software tool polymapR
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Tool usage distribution map

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Associated diseases

This word cloud represents polymapR usage per disease context
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polymapR specifications

Information


Unique identifier OMICS_24785
Name polymapR
Software type Package/Module
Interface Command line interface
Restrictions to use None
Output data A phased integrated map.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0, GNU General Public License version 2.0
Computer skills Advanced
Version 1.0.17
Stability Stable
Requirements
RColorBrewer, rmarkdown, knitr, reshape2, foreach, Hmisc, R(≥3.2.0), igraph, combinat, doParallel, MDSMap, LPmerge
Maintained Yes

Versioning


No version available

Documentation


Maintainers


  • person_outline Roeland E. Voorrips
  • person_outline Peter Bourke
  • person_outline Chris Maliepaard

Publication for polymapR

polymapR citation

library_books

Tools for Genetic Studies in Experimental Populations of Polyploids

2018
Front Plant Sci
PMCID: 5915555
PMID: 29720992
DOI: 10.3389/fpls.2018.00513

[…] The authors of this review have been involved in the development of a number of the software tools mentioned, namely fitTetra, fitPoly, PedigreeSim, TetraOrigin, polymapR, HaploSim, and TriPoly. We have tried to give an impartial perspective where these and alternative tools are concerned. Apart from this, the authors do not have any further conflicts of inter […]


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polymapR institution(s)
Plant Breeding, Wageningen University & Research, PB Wageningen, The Netherlands; Horticulture and Product Physiology, Wageningen University & Research, PB Wageningen, The Netherlands; Biometris, Wageningen University & Research, PB Wageningen, The Netherlands; Van Zanten Breeding B. V., EW, Rijsenhout, The Netherlands
polymapR funding source(s)
Supported through the TKI projects “A genetic analysis pipeline for polyploid crops” (project number BO-26.03-002- 001) and “Novel genetic and genomic tools for polyploid crops” (project number BO-26.03- 009-004).

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