PolyPhen specifications

Unique identifier:
OMICS_00136
Alternative name:
PolyPhen-2
Restrictions to use:
Academic or non-commercial use
Input format:
FASTA
Computer skills:
Basic
Stability:
Stable
Maintained:
Yes
Name:
Polymorphism Phenotyping
Interface:
Web user interface
Input data:
A protein sequence
Output data:
A prediction of probably damaging, possibly damaging, or benign, along with a numerical score ranging from 0.0 (benign) to 1.0 (damaging).
Version:
2.2.2
Source code URL:
http://genetics.bwh.harvard.edu/pph2/dokuwiki/_media/polyphen-2.2.2r405c.tar.gz
  • Animals
    • Homo sapiens

PolyPhen specifications

Unique identifier:
OMICS_00136
Alternative name:
PolyPhen-2
Interface:
Command line interface
Input data:
A protein sequence
Output data:
A prediction of probably damaging, possibly damaging, or benign, along with a numerical score ranging from 0.0 (benign) to 1.0 (damaging).
Computer skills:
Advanced
Stability:
Stable
Name:
Polymorphism Phenotyping
Software type:
Pipeline/Workflow
Restrictions to use:
Academic or non-commercial use
Input format:
FASTA
Operating system:
Unix/Linux, Mac OS
Version:
2.2.2
Maintained:
Yes
  • Animals
    • Homo sapiens

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PolyPhen distribution

download

PolyPhen support

Documentation

Maintainer

  • Shamil R Sunyaev <>
  • Shamil R Sunyaev <>

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Credits

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Publications

Institution(s)

Division of Genetics, Brigham & Women’s Hospital, Harvard Medical School, Boston, MA, USA; Program in Biophysics, Harvard University, Cambridge, MA, USA

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