PoPoolation TE statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.


Citations per year

Citations chart

Popular tool citations

chevron_left Transposon detection chevron_right
Popular tools chart

Tool usage distribution map

Tool usage distribution map

Associated diseases

Associated diseases

PoPoolation TE specifications


Unique identifier OMICS_00119
Name PoPoolation TE
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
License BSD 2-clause “Simplified” License
Computer skills Advanced
Stability Stable
Maintained Yes


Add your version


Publication for PoPoolation TE

PoPoolation TE in publications

PMCID: 4505896
PMID: 26186437
DOI: 10.1371/journal.pgen.1005406

[…] for d. simulans ( and tables). this yields an average coverage of 381 in d. melanogaster and of 327 in d. simulans., one of the requirements for estimating the abundance of te insertions with popoolation te [] is a reliable te data base. a manually curated high-quality annotation of te insertions has been generated for d. melanogaster [, ], whereas, to our knowledge, so far no te […]

PMCID: 4154752
PMID: 25188499
DOI: 10.1371/journal.pone.0106689

[…] to the study of genome evolution, as repeats affect genome size structure, as well as genome function , , –. several tools (e.g. t-lex2 , retroseq , tea , ngs_te_mapper , relocate , retroseq , popoolation te , te-locate ) are currently available for discovery and annotation of te sequences in high-throughput sequencing data. however, because these tools depend on the quality […]

To access a full list of publications, you will need to upgrade to our premium service.

PoPoolation TE institution(s)
Institut für Populationsgenetik, Vetmeduni Vienna, Wien, Austria

PoPoolation TE reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review PoPoolation TE