Population genome analysis software tools and databases

Population genomics steps

Bioinformatics tools

Biological databases

Genetic diversity is the amount of variation observed between DNA sequences from distinct individuals of a given species. This pivotal concept of population genetics has implications for species health, domestication, management and conservation. Levels of genetic diversity seem…

Population genome analysis software tools and databases

Most Recent Tools

Population Lab
Desktop

Population Lab

Provides several models of familial disease aggregation and show that the…

Provides several models of familial disease aggregation and show that the parameters used in the simulations are faithfully estimated. Population Lab is a method and a software package for simulating…

PSMix
Desktop

PSMix Population Structure inference via MIXture model

Uses for population stratification and individual admixture. PSMIX is an R…

Uses for population stratification and individual admixture. PSMIX is an R package based on maximum likelihood method using expectation-maximization algorithm. PSMIX can be used in population…

HGDP
Data

HGDP Human Genome Diversity Project

Allows to genetic diversity in human populations. HGDP has collected genomic…

Allows to genetic diversity in human populations. HGDP has collected genomic DNA from 1,043 individuals from around the world and has determined their genotypes at more than 650,000 single nucleotide…

PGS
Desktop

PGS Population-based Genome Structure

Generates a population of 3D genome structures where each domain is represented…

Generates a population of 3D genome structures where each domain is represented as a sphere. PGS is a user-friendly software package that runs on local machines and high performance computing…

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