PoreWalker pipeline

PoreWalker specifications

Information


Unique identifier OMICS_04691
Name PoreWalker
Interface Web user interface
Restrictions to use None
Input format PDB
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Marialuisa Pellegrini-Calace <>

Publication for PoreWalker

PoreWalker citation

2017
PMCID: 5398642

[…] we modelled the σ-pore in hkv1.2_v370c similar to what was described for the hkv1.3_v388c mutant channel [8] i.e. using the caver program, visualizing the pore with pymol® and verifying it with porewalker as shown in fig 5. for the hkv1.2_v370c mutant channel the entry of the σ-pore is located on the extracellular side of the channel between y377 (shaker position 445) on the back surface […]

PoreWalker institution(s)
EMBL/EBI, The Wellcome Trust Genome Campus, Cambridge, UK

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