PSAMM specifications

Unique identifier:
OMICS_20081
Software type:
Package/Module
Restrictions to use:
Academic or non-commercial use
Programming languages:
Python
Computer skills:
Advanced
Stability:
Stable
Source code URL:
https://codeload.github.com/zhanglab/psamm/tar.gz/v0.31
Name:
Portable System for the Analysis of Metabolic Models
Interface:
Command line interface
Operating system:
Unix/Linux
License:
GNU General Public License version 3.0
Version:
0.31
Requirements:
PyYAML, IBM ILOG Cplex Optimizer, GUROBI Optimizer, QSopt_ex rational solver, xlrd, xlsxwriter, NumPy
Maintained:
Yes

versioning

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PSAMM distribution

download

PSAMM support

Documentation

Maintainer

  • Ying Zhang <>

Additional information

https://zhanglab.github.io/psamm/

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Credits

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Publications

Institution(s)

Department of Cell and Molecular Biology, College of the Environment and Life Sciences, University of Rhode Island, Kingston, RI, USA

Funding source(s)

Supported by the USDA National Institute of Food and Agriculture, Hatch fund, RI0015-H002, Accession No. 1007170, and a pilot project funded by the Institutional Development Award (IDeA) from the National Institute of General Medical Sciences of the National Institutes of Health under grant number 2 P20 GM103430.

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