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Porthodom specifications

Information


Unique identifier OMICS_21953
Name Porthodom
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C++, Python
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Source code URL https://ebbgit.uni-muenster.de/tbitardfeildel/porthoda
Maintained Yes

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Versioning


No version available

Maintainer


  • person_outline Tristan Bitard-Feildel

Publication for Porthodom

Porthodom citation

library_books

New Tools in Orthology Analysis: A Brief Review of Promising Perspectives

2017
Front Genet
PMCID: 5674930
PMID: 29163633
DOI: 10.3389/fgene.2017.00165

[…] In order to minimize the time and computational requirements in comparative analyzes between various sequences of proteins that are available, there is the porthoDom tool. The tool is based on the functional similarity domain of the protein content but their way of comparison is to bring two new measures of similarity between proteins: cosine similarity […]


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Porthodom institution(s)
Institute for Evolution and Biodiversity, University of Münster, Münster, Germany
Porthodom funding source(s)
Supported by DFG grant BO 2544/4-1.

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