Porthodom specifications

Information


Unique identifier OMICS_21953
Name Porthodom
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C++, Python
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Source code URL https://ebbgit.uni-muenster.de/tbitardfeildel/porthoda
Maintained Yes

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Versioning


No version available

Maintainer


  • person_outline Tristan Bitard-Feildel

Publication for Porthodom

Porthodom citation

library_books

New Tools in Orthology Analysis: A Brief Review of Promising Perspectives

2017
Front Genet
PMCID: 5674930
PMID: 29163633
DOI: 10.3389/fgene.2017.00165

[…] nt are grouped by species and it is a tool for groups flexibly orthologs through a parameter adjustment according to the user's interest and it makes the process more automated. The implementation of porthoDom is released using Python and C++ languages and is available under the GNU GPL license 3 but it has not been updated since march 2011. PorthoDom is laborious to runs because uses several tool […]

Porthodom institution(s)
Institute for Evolution and Biodiversity, University of Münster, Münster, Germany
Porthodom funding source(s)
Supported by DFG grant BO 2544/4-1.

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