POSOC specifications

Information


Unique identifier OMICS_18760
Name POSOC
Alternative name POSet Ontology Categorizer
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Windows
Computer skills Advanced
Stability No
Maintained No

Versioning


No version available

Maintainer


This tool is not available anymore.

Publication for POSet Ontology Categorizer

POSOC citation

library_books

Grouping Gene Ontology terms to improve the assessment of gene set enrichment in microarray data

2006
BMC Bioinformatics
PMCID: 1622761
PMID: 17018143
DOI: 10.1186/1471-2105-7-426

[…] being found statistically significant. (The smallest Benjamini and Hochberg adjusted p-value is 0.27, so no significant results can be found at any sensible FDR level.)We now analyze this data using POSOC groups. This data set is from the U74A Affymetrix chip, so the POSOC groups we use are those found using all genes on the U74A chip (and the Biological Process branch of the GO). There are 258 g […]

POSOC institution(s)
Los Alamos National Laboratory, Los Alamos, NM, USA
POSOC funding source(s)
Supported by the Department of Energy under contract W-7405-ENG-36 to the University of California.

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