Post-Search Recalibrator Node protocols

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Post-Search Recalibrator Node specifications

Information


Unique identifier OMICS_21793
Name Post-Search Recalibrator Node
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Version 1.4
Stability Stable
Maintained Yes

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Post-Search Recalibrator Node in pipeline

2017
PMCID: 5305211
PMID: 28109157
DOI: 10.7554/eLife.21477.036

[…] threshold, 33.000 counts., each thermo binary raw file was converted to a dta file using decon2ls () or to an mgf file using proteome discoverer 1.4 (thermo) and -as needed- recalibrated with the post-search recalibrator node. crosslinks were mapped by crossfinder (; ). typical error windows were ±10 ppm for ms1 searches and ±15 ppm for ms2 searches. all amino acid residues were regarded […]


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Post-Search Recalibrator Node in publication

PMCID: 5305211
PMID: 28109157
DOI: 10.7554/eLife.21477.036

[…] threshold, 33.000 counts., each thermo binary raw file was converted to a dta file using decon2ls () or to an mgf file using proteome discoverer 1.4 (thermo) and -as needed- recalibrated with the post-search recalibrator node. crosslinks were mapped by crossfinder (; ). typical error windows were ±10 ppm for ms1 searches and ±15 ppm for ms2 searches. all amino acid residues were regarded […]


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