PPI finder statistics

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PPI finder specifications

Information


Unique identifier OMICS_09844
Name PPI finder
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability No
Maintained No

Taxon


  • Primates
    • Homo sapiens

Maintainer


This tool is not available anymore.

Publication for PPI finder

PPI finder in publications

 (3)
PMCID: 5339786
PMID: 28266596
DOI: 10.1038/srep44017

[…] that interact with lasp-1, the information of target human proteins was retrieved from different public databases, including intact, biogrid, apid, pina2.0, mentha, hitpredict, wiki-pi, pips, ppi-finder and preppi or from the studies reported in pubmed. a total of 390 predicted or experimentally validated lasp-1 interacting proteins were obtained. given that predicated lasp-1 interactions […]

PMCID: 4738386
PMID: 26754646
DOI: 10.1083/jcb.201509017

[…] uniform than in control hair cells (, middle and right). we extended our analysis to two additional potential binding partners of myosin iiia in cochlear hair bundles: coronin-1a (found with the ppi finder tool; ), an actin-binding protein that promotes the cofilin-mediated severing of actin filaments (), and espin-like, an espin paralogue similar in structure to espin-1 (; ). both coronin-1 […]

PMCID: 3663825
PMID: 23497449
DOI: 10.1186/1752-0509-7-22

[…] unrestricted datasets can be large enough but inaccurate and noisy (increases the possibility of generating false positives)., gap is also different from the unsupervised tools such as pip, i2d, and ppi-finder as gap is designed to extract semantic similarities by developing a taxonomy-based scoring measure, and by using leading semantic search engines to extract association information […]


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PPI finder institution(s)
Key Laboratory of Molecular and Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Chaoyang District, Beijing, China

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