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ppiData specifications


Unique identifier OMICS_15699
Name ppiData
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License Artistic License version 2.0
Computer skills Advanced
Version 0.18.0
Stability Stable
AnnotationDbi, graph, org.Sc.sgd.db, ppiStats
Maintained Yes


No version available



  • person_outline Denise Scholtens <>

Publication for ppiData

ppiData citation


Assessing Low Intensity Relationships in Complex Networks

PMCID: 4838277
PMID: 27096435
DOI: 10.1371/journal.pone.0152536

[…] on the data set. however, z* remains the top-performer in three out of five cases, and in the livejournal data set the difference between its performance and the top-performer is only 0.004. in the ppidata set, it has a performance of ppvk = 0.33 with a difference of 0.03 to the top-performing measures rai and adamicadar (both with a ppvk = 0.36)., depicts the result of the local assessment […]

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ppiData funding source(s)
This work was supported by the Human Frontiers Science Program Research Grant RGP0022/2005.

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