PPInterFinder protocols

View PPInterFinder computational protocol

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Popular tool citations

chevron_left Protein-protein interaction prediction Relation extraction chevron_right
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PPInterFinder specifications

Information


Unique identifier OMICS_04863
Name PPInterFinder
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained No

Taxon


  • Primates
    • Homo sapiens

Maintainer


This tool is not available anymore.

Publication for PPInterFinder

PPInterFinder in pipeline

2015
PMCID: 4674139
PMID: 26650466
DOI: 10.1371/journal.pcbi.1004630

[…] syntactic features to effectively capture ppi patterns from biomedical literature [, ]. efip mines information on phosphorylation and related interactions of a given protein using rule-based nlp []. ppinterfinder extracts medline abstracts on human proteins using co-occurrences of protein names, specific keyword dictionary, and pattern matching []. bioqrator can annotate ppi-relevant entity […]


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PPInterFinder institution(s)
Data Mining and Text Mining Laboratory, Department of Bioinformatics, Bharathiar University, Coimbatore, Tamil Nadu, India

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