PPS pipeline

PPS specifications

Information


Unique identifier OMICS_01460
Name PPS
Alternative name PhyloPythiaS
Interface Web user interface
Restrictions to use Academic or non-commercial use
Programming languages Javascript, PHP
Computer skills Basic
Stability Stable
Maintained No

Maintainer


This tool is not maintained anymore.

Publication for PhyloPythiaS

PPS IN pipeline

2015
PMCID: 4309676
PMID: 25673967
DOI: 10.4137/EBO.S20523

[…] we performed three experiments to evaluate our method. firstly, we performed experiments to predict the unknown organisms of simulated metagenomes and compared our results with three other methods, phylopythias,10 phymm,11 and tacoa,12 at the lower taxonomic level. then, we used wsvdd’s training models to analyze the microbial diversity of five real human gut metagenomes. lastly, we evaluated […]

PPS institution(s)
Max-Planck Research Group for Computational Genomics and Epidemiology, Max-Planck Institute for Informatics, Saarbrücken, Germany; Department of Algorithmic Bioinformatics, Heinrich-Heine University, Düsseldorf, Germany
PPS funding source(s)
Max-Planck society; the Heinrich-Heine University

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