pqsfinder specifications

Unique identifier:
OMICS_20573
Interface:
Command line interface
Input data:
Nucleotide sequence
Output data:
Annotation table
Operating system:
Unix/Linux, Mac OS, Windows
License:
BSD 2-clause “Simplified” License
Version:
1.4.9
Stability:
Stable
Software type:
Package/Module
Restrictions to use:
None
Input format:
FASTA, XString
Output format:
GFF3, GRanges, XViews
Programming languages:
R
Computer skills:
Advanced
First release date:
2016
Maintained:
Yes
  • Animals
  • Fungi
  • Plants
  • Viruses

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pqsfinder distribution

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pqsfinder support

Documentation

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Publications

Institution(s)

IT4Innovations Centre of Excellence, Faculty of Information Technology, Brno University of Technology, Brno, Czech Republic; Department of Information Technology, Faculty of Informatics, Masaryk University, Brno, Czech Republic

Funding source(s)

Supported by the Czech Science Foundation [15-02891S], IT4Innovations excellence in science project of the Ministry of Education, Youth and Sports of the Czech Republic [IT4I XS – LQ1602] and ICT tools, methods and technologies for smart cities project of the Brno University of Technology [FIT-S-17-3964].

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