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Predicted Prokaryotic Regulatory Proteins screenshot

Enables users to identify and annotate transcription factors (TFs) and two-component system (TCS) proteins within their sequences of interest. Users can input amino acid or genomic DNA sequences, and predicted proteins therein are scanned for the possession of DNA-binding domains and/or TCS domains. RPs identified in this manner are categorised into families, unambiguously annotated, and a detailed description of their features generated, using an integrated software pipeline. P2RP results can then be outputted in user-specified formats.

Software type:
Framework
Interface:
Web user interface
Restrictions to use:
None
Computer skills:
Basic
Stability:
Stable
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  • (Barakat et al., 2013) P2RP: a Web-based framework for the identification and analysis of regulatory proteins in prokaryotic genomes. BMC genomics.
    PMID: 23601859
  • Eubacteria

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