PP specifications

Information


Unique identifier OMICS_07135
Name PredictProtein
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
High performance computing Yes
Maintained Yes

PP articles

PP citation

2011
PMCID: 3197665

[…] known from twelve organisms including humans were aligned (multiple sequence alignment) using clustalw program [50] available at http://align.genome.jp. secondary structure prediction was done using predictprotein tool from expasy (http://www.predictprotein.org) [51]., homology modeling tools (esypred3d, http://www.fundp.ac.be/sciences/biologie/urbm/bioinfo/esypred/, [52]) and threading methods […]

PP institution(s)
Department of Informatics, Bioinformatics & Computational Biology i12, TUM (Technische Universitat Munchen), Garching/Munich, Germany; Biosof LLC, New York, NY, USA; TUM Graduate School, Center of Doctoral Studies in Informatics and its Applications (CeDoSIA), TUM (Technische Universitat Munchen), Garching/Munich, Germany; New York Consortium on Membrane Protein Structure (NYCOMPS), Columbia University, New York, NY, USA; Department of Genome Oriented Bioinformatics, Technische Universitat Munchen, Freising, Germany; The Department of Cell Research and Immunology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv, Israel; Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, UK; European Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, Cambridgeshire, UK; Department of Pharmacology and Systems Therapeutics, Icahn School of Medicine at Mount Sinai, New York, NY, USA; Department of Biochemistry and Microbiology, Rutgers University, New Brunswick, NJ, USA; Luxembourg University & Luxembourg Centre for Systems Biomedicine, Luxembourg; CMBI, NCMLS, Radboudumc Nijmegen Medical Centre, Nijmegen, Netherlands; Computational Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA; The Department of Biochemistry and Molecular Biology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv, Israel; Department of Biochemistry and Molecular Biophysics & New York Consortium on Membrane Protein Structure (NYCOMPS), Columbia University, New York, NY, USA; Institute for Advanced Study (TUM-IAS), Garching/Munich, Germany; Institute for Food and Plant Sciences WZW-Weihenstephan, Freising, Germany
PP funding source(s)
Supported by Alexander von Humboldt foundation through the German Ministry for Research and Education (BMBF: Bundesministerium fuer Bildung und Forschung).

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