PreDisorder statistics

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PreDisorder specifications

Information


Unique identifier OMICS_03621
Name PreDisorder
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Publication for PreDisorder

PreDisorder in publications

 (10)
PMCID: 5485742
PMID: 28651538
DOI: 10.1186/s12864-017-3853-9

[…] based on experimental evidence (autoactivation). the subcellular localization of arabidopsis proteins was predicted using yloc []. the disordered amino acids in each protein were predicted using predisorder 1.1 []. we calculated the ratio of disordered residues for each protein as the number of disordered amino acids divided by the protein length. predisorder does not work for proteins […]

PMCID: 4683166
PMID: 26680990
DOI: 10.1007/s00894-015-2874-z

[…] as well as the hp1γ linker (ala82 – arg115), we used a meta-prediction approach that integrated the data from prdos [], metaprdos [], poodle [], dispro [], disembl [], iupred [], pondr-fit [], predisorder [], ond-crf [], ronn [], foldindex [], disoclust [], and globplot2 []. as a negative control, we subjected the sequence of an ordered alpha helix from hp1γ (pqiviafyeer; residues 161–171) […]

PMCID: 4632708
PMID: 26426014
DOI: 10.3390/ijms161023446

[…] different manner []. it is the first time to predict disorder proteins using such method. the dataset used for training is from 723 proteins originally used for the development of dispro [] and predisorder []. those proteins are more than 30 residues in length, and comprised of 13909 disordered residues (about 6.5% disordered). in addition, dndisorder also utilized the dataset from casp9 […]

PMCID: 4546970
PMID: 26347798
DOI: 10.1155/2015/912742

[…] []. a residue locating inside a disorder region was defined as beholding a disorder score larger than 0.5. to validate the prediction of iupred, other prediction pieces of software, such as predisorder [] and pondr [–], were also used to predict the structure of the 108 fusion proteins., we predicted the phosphorylation sites on fusion proteins using netphos 2.0 server, […]

PMCID: 4519904
PMID: 26198229
DOI: 10.3390/ijms160715384

[…] to learn mappings from a protein’s sequence to the ordered/disordered state of a protein []. some examples of this approach include dndisorder [], spine-d [], espritz [], ronn [], disopred [,] and predisorder []. dndisorder, for example, is a sequence-based approach for predicting disorder developed using ensembles of deep networks. training of the deep network was done using the disorder723 […]


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PreDisorder institution(s)
Department of Computer Science, University of Missouri-Columbia, Columbia, MO, USA

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