PREDITOR pipeline

PREDITOR specifications


Unique identifier OMICS_10808
Interface Web user interface
Restrictions to use None
Input data PREDITOR accepts three kinds of input files: (i) chemical shift assignments in BMRB NMR-STAR format, (ii) chemical shift assignments in SHIFTY format and (iii) raw protein sequence in FASTA format.
Computer skills Basic
Stability Stable
Maintained Yes


  • person_outline David Wishart <>

Publication for PREDITOR

PREDITOR IN pipeline

PMCID: 3973705
PMID: 24695525
DOI: 10.1371/journal.pone.0093228

[…] for dimer, and 70 distance and 10 h-bonding constraints between the monomers. to generate an initial model of the global fold, a set of 1156 manually assigned and unambiguous noes and 176 preditor-derived phi/psi dihedral angle restraints were used. this preliminary model was used to resolve ambiguous noes and then added to the restraint set and this method was continued iteratively. […]

PREDITOR institution(s)
Department of Computing Science, University of Alberta Edmonton, AB, Canada; Department of Biological Sciences, University of Alberta Edmonton, AB, Canada; NRC National Institute for Nanotechnology (NINT), Edmonton AB, Canada
PREDITOR funding source(s)
Funding for this project was provided by the Protein Engineering Network of Centres of Excellence (PENCE), the Natural Sciences and Engineering Research Council (NSERC), the National Research Council (NINT) and Genome Alberta (a division of Genome Canada).

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