Predotar protocols

Predotar specifications

Information


Unique identifier OMICS_05418
Name Predotar
Alternative name Prediction of Organelle Targeting sequences
Interface Web user interface
Restrictions to use None
Computer skills Basic
Version 1.04
Stability Stable
Maintained Yes

Publication for Prediction of Organelle Targeting sequences

Predotar IN pipeline

2014
PMCID: 3906766
PMID: 24438075
DOI: 10.1186/1471-2164-15-46

[…] training and accuracy estimation, we used blastclust 2.2.22 [34] to remove redundant sequences with a setting of 20% identity. for proteins in human and a few plant species we adopted the dataset of predotar [35] and for plants augmented that small number by experimental proteomics data determined in the mass spectrometry experiment of huang et al. [11]., we gathered protein sequences from 11 […]

Predotar institution(s)
Station de Génétique et Amélioration des Plantes, INRA, Versailles, France; Unité de Recherche en Génomique Végétale (INRA-CNRS-UEVE), Evry, France; Unité de Recherche en Génomique-Info (INRA), Evry, France
Predotar funding source(s)
Funded by Génoplante (project Bi1999030).

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