PredSL statistics

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Associated diseases

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PredSL specifications

Information


Unique identifier OMICS_05417
Name PredSL
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Publication for PredSL

PredSL in publications

 (17)
PMCID: 5737649
PMID: 29126146
DOI: 10.1093/gbe/evx231

[…] 10, 2017, ), targetp1.1 (http://www.cbs.dtu.dk/services/targetp/; last accessed november 10, 2017, ), predotar (https://urgi.versailles.inra.fr/predotar/; last accessed november 10, 2017; ), and predsl (http://aias.biol.uoa.gr/predsl/input.html; last accessed november 10, 2017, ) were used to predict n-terminal targeting signals such as signal peptides and mitochondrial targeting peptides, […]

PMCID: 5601477
PMID: 28916813
DOI: 10.1038/s41598-017-11866-x

[…] signalp4.1 (http://www.cbs.dtu.dk/services/signalp/), targetp1.1 (http://www.cbs.dtu.dk/services/targetp/), predotar (https://urgi.versailles.inra.fr/predotar/predotar.html) and predsl (http://aias.biol.uoa.gr/predsl/input.html). tmds were predicted using tmhmm2.0 (http://www.cbs.dtu.dk/services/tmhmm/) and topcons (http://topcons.cbr.su.se). perkinsela sp. proteins […]

PMCID: 5539789
PMID: 28824680
DOI: 10.3389/fpls.2017.01345

[…] database searches and bioinformatics prediction. the following on-line prediction programs were consulted: targeting signal prediction programs targetp1.1, chlorop1.1, signalp4.1, protein prowler, predsl, and predplantpts1 and subcellular localization prediction programs wolf psort ii, protcomp 9.0, uniprotkb, and cello v2.5. for each program, the default “cut-off” and organism “plant,” […]

PMCID: 5499015
PMID: 28679357
DOI: 10.1186/s12864-017-3894-0

[…] programs included wolf psort ([]; https://wolfpsort.hgc.jp/), targetp ([]; http://www.cbs.dtu.dk/services/targetp/), slp-local ([]; http://sunflower.kuicr.kyoto-u.ac.jp/~smatsuda/slplocal.html), predsl ([]; http://aias.biol.uoa.gr/predsl/input.html) and predotar ([]; https://urgi.versailles.inra.fr/tools/predotar). subsequent analysis in some cases was performed using mitoprot ([]; […]

PMCID: 5435750
PMID: 28572813
DOI: 10.3389/fpls.2017.00831

[…] and subcellular localizations, whole amino acid sequences of the four target enzymes were analyzed using the on-line signal peptide prediction programs targetp1.1, chlorop1.1, signalp4.1, and predsl, and the subcellular localization prediction programs wolf psort ii, protcomp 9.0 and uniprotkb. for all programs, the defaults “cut-off” and “plant,” or “eukaryotes” if “plant” […]


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