PREFAB specifications


Unique identifier OMICS_00984
Alternative name Protein Reference Alignment Benchmark
Restrictions to use None
Community driven No
Data access File download
User data submission Not allowed
Version 4.0
Maintained Yes


  • person_outline Robert Edgar

Publications for Protein Reference Alignment Benchmark

PREFAB citation


Accuracy of structure based sequence alignment of automatic methods

BMC Bioinformatics
PMCID: 2039753
PMID: 17883866
DOI: 10.1186/1471-2105-8-355

[…] rotein structures; PASS2, Protein Alignments organised as Structural Superfamilies (version 2); Pfam, multiple sequence alignments and HMM-profiles of protein domains; PDB, Protein Data Bank; PREFAB, Protein REFerence Alignment Benchmark; S4, Structure-based Sequence alignments of SCOP Superfamilies; SABmark, Sequence Alignment Benchmark; SCOP, Structural Classification of Proteins; SMART, Simple […]

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