Preprocessed Connectomes Project statistics

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Preprocessed Connectomes Project specifications

Information


Unique identifier OMICS_16717
Name Preprocessed Connectomes Project
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Stability Stable
Maintained Yes

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  • person_outline Cameron Craddock <>

Publication for Preprocessed Connectomes Project

Preprocessed Connectomes Project in publications

 (17)
PMCID: 5915574
PMID: 29307608
DOI: 10.1016/j.neuroimage.2017.12.098

[…] t with the abide-nyu cohort we describe in the following., we use use 20 healthy subjects of new york university (nyu) data-set. for full details visit pre-processed connectome project website http://preprocessed-connectomes-project.org/; in brief, 6 min eyes-closed resting acquisitions were taken on an allegra 3t scanner with a gradient echo epi sequence, tr = 2000ms, te = 15ms, flip angle = 90°, […]

PMCID: 5904282
PMID: 29695950
DOI: 10.3389/fnins.2018.00234

[…] functional connectivity of insular subregions., we used the dataset of the university of california, los angeles, one of the subsamples in the autism brain imaging data exchange database (http://preprocessed-connectomes-project.org/abide/download.html). in regards to inclusion criteria, asd had a prior clinical diagnosis of autism based on criteria from the diagnostic and statistical manual […]

PMCID: 5802096
PMID: 29415768
DOI: 10.1186/s13195-017-0314-2

[…] metrics, a bayesian-based strategy is being developed which will use the current manual/semi-automatic qa information for training after processing the images using the pcp-qa package (www.preprocessed-connectomes-project.org/quality-assessment-protocol/)). details on individual mr sequences and the fmri experiments will be reported together with results in subsequent publications., […]

PMCID: 5770339
PMID: 29079522
DOI: 10.1016/j.neuroimage.2017.10.034

[…] procedure., http://www.fmrib.ox.ac.uk/datasets/ukbiobank/nnpaper/idpinfo.txt., a comprehensive list of possible artefacts and proposed qualitative quality recommendations can be found in ., http://preprocessed-connectomes-project.org/quality-assessment-protocol/()., https://amsportal.ukbiobank.ac.uk/sitepages/sign%20in.aspx., manual qc was possible because at that stage, we were dealing […]

PMCID: 5635344
PMID: 29034163
DOI: 10.1016/j.nicl.2017.08.017

[…] is calculated for the average of the time series of the regions of interest. the correlation is used to build a connectivity matrix., previously preprocessed rs-fmri data was downloaded from the preprocessed connectomes project (http://preprocessed-connectomes-project.org/). data was selected from the c-pac preprocessing pipeline. the fmri data was slice time corrected, motion corrected, […]


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Preprocessed Connectomes Project institution(s)
Child Mind Institute, Center for the Developing Brain, New York, NY, USA; Nathan S. Kline Institute for Psychiatric Research, Center for Biomedical Imaging and Neuromodulation, New York, NY, USA; Yale University, Department of Psychology, New Haven, CT, USA; Universite´ de Montre´al, Département d’anthropologie, Montre´al, Canada; Centre de recherche de l’institut de ge´riatrie de Montre´al, Montre´al, Canada
Preprocessed Connectomes Project funding source(s)
This project is supported by the Nathan S. Kline Institute for Psychiatric Research, the New York State Office of Mental Health, the Research Foundation for Mental Hygiene, and the Child Mind Institute.

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