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Citations per year

Number of citations per year for the bioinformatics software tool PresCont

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PresCont specifications


Unique identifier OMICS_08138
Name PresCont
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes


No version available

Publication for PresCont

PresCont citations


Utilizing knowledge base of amino acids structural neighborhoods to predict protein protein interaction sites

BMC Bioinformatics
PMCID: 5731498
PMID: 29244012
DOI: 10.1186/s12859-017-1921-4

[…] well. For the PlaneDimers and TransComp1 datasets, surface residues were defined as those with RASA≥0.05 while for DS188 the rule was RASA>0.Results showing the comparison of INSPiRE with SPPIDER [], PresCont [] and MetaPPISP [] in terms of MCC on the PlaneDimers and TransComp1 datasets are in Table . The MCC values of the other methods are taken from []. The comparison with PredUs [], PrISE [], R […]


Algorithmic approaches to protein protein interaction site prediction

PMCID: 4338852
PMID: 25713596
DOI: 10.1186/s13015-015-0033-9

[…] The PresCont algorithm [] combines local residue features with environmental information as input to an SVM. The creators of PresCont note their belief that interface prediction will not benefit from the […]


CRF based models of protein surfaces improve protein protein interaction site predictions

BMC Bioinformatics
PMCID: 4150965
PMID: 25124108
DOI: 10.1186/1471-2105-15-277

[…] ].The data set PlaneDimers is less known than the data due to Keskin et al.. It consists of redundancy-free homodimers with flat protein-protein interfaces. Zellner et al. [] developed an SVM, called PresCont, that assigns to each residue on the protein surface a score between 0 and 1, which we refer to as PresCont score in the sequel. The larger the score, the more likely the residue belongs to t […]

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PresCont institution(s)
Institute of Biophysics and Physical Biochemistry, University of Regensburg, Regensburg, Germany

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