PresCont statistics

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Citations per year

Number of citations per year for the bioinformatics software tool PresCont
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Tool usage distribution map

This map represents all the scientific publications referring to PresCont per scientific context
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PresCont specifications

Information


Unique identifier OMICS_08138
Name PresCont
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Publication for PresCont

PresCont citations

 (3)
library_books

Utilizing knowledge base of amino acids structural neighborhoods to predict protein protein interaction sites

2017
BMC Bioinformatics
PMCID: 5731498
PMID: 29244012
DOI: 10.1186/s12859-017-1921-4

[…] well. For the PlaneDimers and TransComp1 datasets, surface residues were defined as those with RASA≥0.05 while for DS188 the rule was RASA>0.Results showing the comparison of INSPiRE with SPPIDER [], PresCont [] and MetaPPISP [] in terms of MCC on the PlaneDimers and TransComp1 datasets are in Table . The MCC values of the other methods are taken from []. The comparison with PredUs [], PrISE [], R […]

library_books

Algorithmic approaches to protein protein interaction site prediction

2015
PMCID: 4338852
PMID: 25713596
DOI: 10.1186/s13015-015-0033-9

[…] The PresCont algorithm [] combines local residue features with environmental information as input to an SVM. The creators of PresCont note their belief that interface prediction will not benefit from the […]

library_books

CRF based models of protein surfaces improve protein protein interaction site predictions

2014
BMC Bioinformatics
PMCID: 4150965
PMID: 25124108
DOI: 10.1186/1471-2105-15-277

[…] ].The data set PlaneDimers is less known than the data due to Keskin et al.. It consists of redundancy-free homodimers with flat protein-protein interfaces. Zellner et al. [] developed an SVM, called PresCont, that assigns to each residue on the protein surface a score between 0 and 1, which we refer to as PresCont score in the sequel. The larger the score, the more likely the residue belongs to t […]


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PresCont institution(s)
Institute of Biophysics and Physical Biochemistry, University of Regensburg, Regensburg, Germany

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