Preseq protocols

Preseq specifications


Unique identifier OMICS_05451
Name Preseq
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS
Computer skills Advanced
Stability Stable
Maintained Yes



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Publication for Preseq

Preseq IN pipeline

PMCID: 5696376
PMID: 29158493
DOI: 10.1038/s41467-017-01679-x

[…] percentages of the observed cis interactions in the expected total number of cis interactions were calculated for each bait. the total number of distinct cis interactions was estimated by using preseq software70., using the read count data at each hindiii site (wiggle format data), we analyzed the contact probabilities of the hindiii site by the following method53. in our analysis, instead […]

Preseq institution(s)
Department of Mathematics and Department of Molecular and Computational Biology, University of Southern California, Los Angeles, CA, USA

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