PrIME-GSR statistics

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Associated diseases

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PrIME-GSR specifications

Information


Unique identifier OMICS_18452
Name PrIME-GSR
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS
Programming languages C++
Computer skills Advanced
Version 1.0
Stability Stable
Requirements
Bison, Flex, LAPACK, BLAS
Source code URL http://prime.scilifelab.se/primeGSR/downloads/primegsr_1.0.tgz
Maintained Yes

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Documentation


Maintainer


  • person_outline Jens Lagergren <>

Publication for PrIME-GSR

PrIME-GSR in publication

PMCID: 4393519
PMID: 25481006
DOI: 10.1093/bioinformatics/btu806

[…] tree and a reconciliation model that makes it possible to extract topological information from the species tree and use it to guide gene tree inference. some of these methods, such as treebest (), prime-gsr (dlrs) () and spimap (), reconstruct a gene tree directly from sequence data, but most, such as notung (), tt (), treefix (), angst () and mowglinni (), take in previously reconstructed […]


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PrIME-GSR institution(s)
School for Computer Science and Communication, Royal Institute of Technology, Stockholm, Sweden; Stockholm Bioinformatics Center, AlbaNova, Stockholm University, Stockholm, Sweden
PrIME-GSR funding source(s)
Supported by the Swedish Research Council.

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