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Primer databases | qPCR analysis

Primer databases for PCR data analysis.

RTPrimerDB
Dataset

RTPrimerDB

A public database for primer and probe sequences used in real-time PCR assays…

A public database for primer and probe sequences used in real-time PCR assays employing popular chemistries (SYBR Green I, Taqman, Hybridisation Probes, Molecular Beacon) to prevent time-consuming…

PrimerBank
Dataset

PrimerBank

Provides polymerase chain reaction (PCR) and qPCR primers. PrimerBank contains…

Provides polymerase chain reaction (PCR) and qPCR primers. PrimerBank contains 497 156 primers that cover 36 928 human and mouse genes, corresponding to around 94% of all known protein-coding…

qPrimerDepot
Dataset

qPrimerDepot

Provides optimized primers for all human and mouse RefSeq genes. qPrimerDepot…

Provides optimized primers for all human and mouse RefSeq genes. qPrimerDepot contains primers sets designed to be used under uniform annealing temperatures to facilitate their application in large…

MRPrimerV
Dataset

MRPrimerV

A database to help viruses detection. MRPrimerV database contains 152,380,247…

A database to help viruses detection. MRPrimerV database contains 152,380,247 PCR primer pairs for detection of 1,818 viruses, covering 7,144 coding sequences (CDSs), representing 100% of the RNA…

probeBase
Dataset

probeBase

A manually maintained and curated database of rRNA-targeted oligonucleotide…

A manually maintained and curated database of rRNA-targeted oligonucleotide probes and primers. Contextual information and multiple options for evaluating in silico hybridization performance against…

AtRTPrimer
Dataset

AtRTPrimer

Represents a genome-wide homogeneous and specific primer-pair database in…

Represents a genome-wide homogeneous and specific primer-pair database in Arabidopsis. AtRTPrimer provides a reliable primer pair of a target gene for singleplex polymerase chain reaction (PCR)…

Probe
Dataset

Probe

A registry of nucleic acid reagents designed for use in a wide variety of…

A registry of nucleic acid reagents designed for use in a wide variety of biomedical research applications including genotyping, SNP discovery, gene expression, gene silencing and gene mapping. Probe…

qPrimerDB
Dataset

qPrimerDB

Provides an interactive and information-rich web graphical interface to display…

Provides an interactive and information-rich web graphical interface to display search and BLAST results as table-based descriptions and associated links. The qPrimerDB is a comprehensive primer…

GETPrime
Dataset

GETPrime

Enables to retrieve gene or transcript-specific primers for several species…

Enables to retrieve gene or transcript-specific primers for several species genes in assembled chromosomes annotated in the Ensembl database. GETPrime is a primer database supported by a platform…

VirOligo
Dataset

VirOligo

A database of virus-specific oligonucleotides. The VirOligo database collects…

A database of virus-specific oligonucleotides. The VirOligo database collects virus-specific oligonucleotides for virus detection from published literature. The database consists of two tables,…

OligoGenome
Dataset

OligoGenome Stanford Human Oligo Genome Project

Provides oligonucleotide capture sequences that span the human genome.…

Provides oligonucleotide capture sequences that span the human genome. OligoGenome offers functions to browse, filter and download capture oligonucleotide sequences based upon user queried genomic…

HIVoligoDB
Dataset

HIVoligoDB The HIV oligonucleotide database

Provides a set of oligonucleotides and genomic regions that can be used to…

Provides a set of oligonucleotides and genomic regions that can be used to improve the efficiency of Human Immunodeficiency Virus (HIV) epidemiological studies and nucleic acid-based assays.…

OcaPPI-Db
Dataset

OcaPPI-Db Oligonucleotide Capture Probes for Pathogen Identification Database

Provides an oligonucleotide hybridization capture probe database targeting…

Provides an oligonucleotide hybridization capture probe database targeting virulence factors and genes used to discriminate the National Institute of Allergy and Infectious Diseases (NIAID)’s…

Whole…
Dataset

Whole Transcriptome qPCR Primers

A set of rules to automatically design all possible exon-exon and intron-exon…

A set of rules to automatically design all possible exon-exon and intron-exon junctions in the human and mouse transcriptomes.

Wheat D Genome…
Dataset

Wheat D Genome Specific Marker Resource

A database of genetic and physical maps, genetic markers and marker sequences…

A database of genetic and physical maps, genetic markers and marker sequences for wheat D Genome, accumulates and releases up-to-date information on Ae.tauschii genome sequencing. Wheat D Genome…

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