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PrimerHunter specifications

Information


Unique identifier OMICS_03929
Name PrimerHunter
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Publication for PrimerHunter

PrimerHunter in publications

 (3)
PMCID: 5077074
PMID: 27776150
DOI: 10.1371/journal.pone.0165273

[…] stored in a -20 c freezer prior to dna extraction. for more detail on the performance of ctab storage of edna filter samples, see []., primers for n. alabamensis and s. depressus were designed using primerhunter [] and checked for cross-amplification with closely related taxa (). due to the paucity of publicly available sequence data for both the focal necturus and sternotherus taxa, fragments […]

PMCID: 5053277
PMID: 27773942
DOI: 10.1111/1365-2664.12621

[…] cytochrome c oxidase subunit 1 (coi) sequences for the 12 species of crayfishes likely to occur in lakes in the upper midwest, usa (peters et al. ; table ), and subsequently designed primers with primerhunter (duitama et al. ). recommended primer pairs were synthesized by integrated dna technologies (idt) and evaluated in the laboratory for successful amplification with orconectes rusticus […]

PMCID: 3843705
PMID: 24312367
DOI: 10.1371/journal.pone.0081842

[…] mk iim. designed the primers: iim. extracted rna and performed subtyping pcr assays: yh. all authors read and approved the final manuscript.. , we have previously developed a software package called primerhunter to design primers for pcr-based virus subtyping. in this study, 9 pairs of primers were designed with primerhunter and successfully used to differentiate the 9 neuraminidase (na) genes […]


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PrimerHunter institution(s)
Department of Computer Science and Engineering, University of Connecticut, Storrs, CT, USA

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