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PrimeX specifications

Information


Unique identifier OMICS_18856
Name PrimeX
Software type Application/Script
Interface Command line interface, Graphical user interface
Restrictions to use License purchase required
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Free trial Yes
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline QikProp Team

Additional information


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Publication for PrimeX

PrimeX citation

library_books

Significant reduction in errors associated with nonbonded contacts in protein crystal structures: automated all atom refinement with PrimeX

2012
PMCID: 3413210
PMID: 22868759
DOI: 10.1107/S0907444912017453

[…] n other words, one does not know how far is too far. This procedure could be especially dangerous if the original clashes were caused by atoms that were significantly misplaced.The refinement program PrimeX was implemented partially in response to these issues. It applies well established methods of protein crystal structure refinement (Bell et al., 2012) combined with the all-atom OPLS force fiel […]


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